9 Managing software with command line tools #

The general syntax of Zypper is:

zypper [--global-options] COMMAND  [--command-options] [arguments]

The components enclosed in brackets are not required. See zypper help for a list of general options and all commands. To get help for a specific command, type zypper help COMMAND.

You can combine all of the above. For example, the following command will install the mc and vim packages from the factory repository while being verbose:

> sudo zypper -v install --from factory mc vim

The --from option keeps all repositories enabled (for solving any dependencies) while requesting the package from the specified repository. --repo is an alias for --from, and you may use either one.

Most Zypper commands have a dry-run option that does a simulation of the given command. It can be used for test purposes.

> sudo zypper remove --dry-run MozillaFirefox

Zypper supports the global --userdata STRING option. You can specify a string with this option, which gets written to Zypper's log files and plug-ins (such as the Btrfs plug-in). It can be used to mark and identify transactions in log files.

> sudo zypper --userdata STRING patch

Zypper subcommands are executables that are stored in the directory specified by the zypper_execdir configuration option. It is /usr/lib/zypper/commands by default. If a subcommand is not found there, Zypper automatically searches the rest of your $PATH locations for it. This lets you create your own local extensions and store them in user space.

Executing subcommands in the Zypper shell, and using global Zypper options are not supported.

List your available subcommands:

> zypper help subcommand
[...]
Available zypper subcommands in '/usr/lib/zypper/commands'

  appstream-cache
  lifecycle
  migration
  search-packages

Zypper subcommands available from elsewhere on your $PATH

  log                   Zypper logfile reader
                            (/usr/sbin/zypper-log)

View the help screen for a subcommand:

> zypper help appstream-cache

To install or remove packages, use the following commands:

> sudo zypper install PACKAGE_NAME
> sudo zypper remove PACKAGE_NAME

Warning: Do not remove mandatory system packages

Do not remove mandatory system packages like glibc , zypper , kernel . If they are removed, the system can become unstable or stop working altogether.

> sudo zypper install emacs -vim

> sudo zypper remove emacs +vim

> sudo zypper install -emacs +vim       # Wrong
> sudo zypper install vim -emacs        # Correct
> sudo zypper install -- -emacs +vim    # Correct
> sudo zypper remove emacs +vim         # Correct

> sudo zypper rm --clean-deps PACKAGE_NAME

> sudo zypper --non-interactive install PACKAGE_NAME

> zypper source-install PACKAGE_NAME

> sudo zypper source-install -D PACKAGE_NAME

> sudo zypper source-install -d PACKAGE_NAME

> zypper search -t srcpackage

> zypper source-download

9.1.3.6 Installing packages from disabled repositories #

  

Normally you can only install or refresh packages from enabled repositories. The --plus-content TAG option helps you specify repositories to be refreshed, temporarily enabled during the current Zypper session, and disabled after it completes.

For example, to enable repositories that may provide additional -debuginfo or -debugsource packages, use --plus-content debug. You can specify this option multiple times.

To temporarily enable such 'debug' repositories to install a specific -debuginfo package, use the option as follows:

> sudo zypper --plus-content debug \
   install "debuginfo(build-id)=eb844a5c20c70a59fc693cd1061f851fb7d046f4"

The build-id string is reported by gdb for missing debuginfo packages.

Note: Disabled installation media

Repositories from the SUSE Linux Enterprise Server installation media are still configured but disabled after successful installation. You can use the --plus-content option to install packages from the installation media instead of the online repositories. Before calling zypper, ensure the media is available, for example by inserting the DVD into the computer's drive.

> zypper verify

> sudo zypper install-new-recommends

There are three different ways to update software using Zypper: by installing patches, by installing a new version of a package or by updating the entire distribution. The latter is achieved with zypper dist-upgrade. Upgrading SUSE Linux Enterprise Server is discussed in Chapter 1, Upgrade paths and methods.

> sudo zypper patch

> sudo zypper patch --with-update

> sudo zypper patch --with-optional

> sudo zypper patch --bugzilla=NUMBER

> sudo zypper patch --cve=NUMBER

> sudo zypper patch --cve=CVE-2010-2713

> sudo zypper patch --updatestack-only

> zypper list-patches --all --cve
Issue | No.           | Patch             | Category    | Severity  | Status
------+---------------+-------------------+-------------+-----------+----------
cve   | CVE-2019-0287 | SUSE-SLE-Module.. | recommended | moderate  | needed
cve   | CVE-2019-3566 | SUSE-SLE-SERVER.. | recommended | moderate  | not needed
[...]

9.1.4.3 Installing new package versions #

  

If a repository contains only new packages, but does not provide patches, zypper patch does not show any effect. To update all installed packages with newer available versions, use the following command:

> sudo zypper update

Important

zypper update ignores problematic packages. For example, if a package is locked, zypper update omits the package, even if a higher version of it is available. Conversely, zypper patch reports a conflict if the package is considered vulnerable.

To update individual packages, specify the package with either the update or install command:

> sudo zypper update PACKAGE_NAME
> sudo zypper install PACKAGE_NAME

A list of all new installable packages can be obtained with the command:

> zypper list-updates

Note that this command only lists packages that match the following criteria:

• has the same vendor like the already installed package,

• is provided by repositories with at least the same priority than the already installed package,

• is installable (all dependencies are satisfied).

A list of all new available packages (regardless whether installable or not) can be obtained with:

> sudo zypper list-updates --all

To find out why a new package cannot be installed, use the zypper install or zypper update command as described above.

> sudo zypper packages --orphaned

When patching, updating, or removing packages, there may be running processes on the system which continue to use files having been deleted by the update or removal. Use zypper ps to list processes using deleted files. In case the process belongs to a known service, the service name is listed, making it easy to restart the service. By default zypper ps shows a table:

> zypper ps
PID   | PPID | UID | User  | Command      | Service      | Files
------+------+-----+-------+--------------+--------------+-------------------
814   | 1    | 481 | avahi | avahi-daemon | avahi-daemon | /lib64/ld-2.19.s->
      |      |     |       |              |              | /lib64/libdl-2.1->
      |      |     |       |              |              | /lib64/libpthrea->
      |      |     |       |              |              | /lib64/libc-2.19->
[...]

The output format of zypper ps can be controlled as follows:

For more information about service handling refer to Chapter 19, The systemd daemon.

All installation or patch commands of Zypper rely on a list of known repositories. To list all repositories known to the system, use the command:

> zypper repos

The result will look similar to the following output:

> zypper repos
# | Alias        | Name          | Enabled | Refresh
--+--------------+---------------+---------+--------
1 | SLEHA-15-GEO | SLEHA-15-GEO  | Yes     | No
2 | SLEHA-15     | SLEHA-15      | Yes     | No
3 | SLES15       | SLES15        | Yes     | No

When specifying repositories in various commands, an alias, URI or repository number from the zypper repos command output can be used. A repository alias is a short version of the repository name for use in repository handling commands. Note that the repository numbers can change after modifying the list of repositories. The alias will never change by itself.

By default, details such as the URI or the priority of the repository are not displayed. Use the following command to list all details:

> zypper repos -d

> sudo zypper addrepo URI ALIAS

9.1.6.2 Refreshing repositories #

  

zypper enables you to fetch changes in packages from configured repositories. To fetch the changes, run:

> sudo zypper refresh

Note: Default behavior of zypper

By default, some commands perform refresh automatically, so you do not need to run the command explicitly.

The refresh command enables you to view changes also in disabled repositories, by using the --plus-content option:

> sudo zypper --plus-content refresh

This option fetches changes in repositories, but keeps the disabled repositories in the same state—disabled.

> sudo zypper removerepo 1
> sudo zypper removerepo "SLEHA-12-GEO"

> sudo zypper modifyrepo -er -p 20 'updates'

> sudo zypper renamerepo 'Mozilla Firefox' firefox

Zypper offers various methods to query repositories or packages. To get lists of all products, patterns, packages or patches available, use the following commands:

> zypper products
> zypper patterns
> zypper packages
> zypper patches

To query all repositories for certain packages, use search. To get information regarding particular packages, use the info command.

> zypper search-packages package1 package2

> zypper what-provides 'perl(SVN::Core)'

> zypper info --requires MozillaFirefox

SUSE products are generally supported for 10 years. Often, you can extend that standard lifecycle by using the extended support offerings of SUSE which add three years of support. Depending on your product, find the exact support lifecycle at https://www.suse.com/lifecycle.

To check the lifecycle of your product and the supported package, use the zypper lifecycle command as shown below:

# zypper lifecycle
    Product end of support
Codestream: SUSE Linux Enterprise Server 15             2028-07-31
    Product: SUSE Linux Enterprise Server 15 SP3        n/a*

Module end of support
Basesystem Module                                       n/a*
Desktop Applications Module                             n/a*
Server Applications Module                              n/a*

Package end of support if different from product:
autofs                                   Now, installed 5.1.3-7.3.1, update available 5.1.3-7.6.1

Zypper now comes with a configuration file, allowing you to permanently change Zypper's behavior (either system-wide or user-specific). For system-wide changes, edit /etc/zypp/zypper.conf. For user-specific changes, edit ~/.zypper.conf. If ~/.zypper.conf does not yet exist, you can use /etc/zypp/zypper.conf as a template: copy it to ~/.zypper.conf and adjust it to your liking. Refer to the comments in the file for help about the available options.

If you have trouble accessing packages from configured repositories (for example, Zypper cannot find a certain package even though you know it exists in one of the repositories), refreshing the repositories may help:

> sudo zypper refresh

If that does not help, try

> sudo zypper refresh -fdb

This forces a complete refresh and rebuild of the database, including a forced download of raw metadata.

If the Btrfs file system is used on the root partition and snapper is installed, Zypper automatically calls snapper when committing changes to the file system to create appropriate file system snapshots. These snapshots can be used to revert any changes made by Zypper. See Chapter 10, System recovery and snapshot management with Snapper for more information.

For more information on managing software from the command line, enter zypper help, zypper help  COMMAND or refer to the zypper(8) man page. For a complete and detailed command reference, cheat sheets with the most important commands, and information on how to use Zypper in scripts and applications, refer to https://en.opensuse.org/SDB:Zypper_usage. A list of software changes for the latest SUSE Linux Enterprise Server version can be found at https://en.opensuse.org/openSUSE:Zypper_versions.

RPM packages have a GPG signature. To verify the signature of an RPM package, use the command rpm --checksig  PACKAGE-1.2.3.rpm to determine whether the package originates from SUSE or from another trustworthy facility. This is especially recommended for update packages from the Internet.

While fixing issues in the operating system, you might need to install a Problem Temporary Fix (PTF) into a production system. The packages provided by SUSE are signed against a special PTF key. However, in contrast to SUSE Linux Enterprise 11, this key is not imported by default on SUSE Linux Enterprise 12 systems. To manually import the key, use the following command:

> sudo rpm --import \
/usr/share/doc/packages/suse-build-key/suse_ptf_key.asc

After importing the key, you can install PTF packages on your system.

Normally, the installation of an RPM archive is quite simple: rpm -i PACKAGE.rpm. With this command the package is installed, but only if its dependencies are fulfilled and if there are no conflicts with other packages. With an error message, rpm requests those packages that need to be installed to meet dependency requirements. In the background, the RPM database ensures that no conflicts arise—a specific file can only belong to one package. By choosing different options, you can force rpm to ignore these defaults, but this is only for experts. Otherwise, you risk compromising the integrity of the system and possibly jeopardize the ability to update the system.

The options -U or --upgrade and -F or --freshen can be used to update a package (for example, rpm -F PACKAGE.rpm). This command removes the files of the old version and immediately installs the new files. The difference between the two versions is that -U installs packages that previously did not exist in the system, while -F merely updates previously installed packages. When updating, rpm updates configuration files carefully using the following strategy:

Following an update, .rpmsave and .rpmnew files should be removed after comparing them, so they do not obstruct future updates. The .rpmorig extension is assigned if the file has not previously been recognized by the RPM database.

Otherwise, .rpmsave is used. In other words, .rpmorig results from updating from a foreign format to RPM. .rpmsave results from updating from an older RPM to a newer RPM. .rpmnew does not disclose any information to whether the system administrator has made any changes to the configuration file. A list of these files is available in /var/adm/rpmconfigcheck. Some configuration files (like /etc/httpd/httpd.conf) are not overwritten to allow continued operation.

The -U switch is not only an equivalent to uninstalling with the -e option and installing with the -i option. Use -U whenever possible.

To remove a package, enter rpm -e PACKAGE. This command only deletes the package if there are no unresolved dependencies. It is theoretically impossible to delete Tcl/Tk, for example, as long as another application requires it. Even in this case, RPM calls for assistance from the database. If such a deletion is, for whatever reason, impossible (even if no additional dependencies exist), it may be helpful to rebuild the RPM database using the option --rebuilddb.

Delta RPM packages contain the difference between an old and a new version of an RPM package. Applying a delta RPM onto an old RPM results in a completely new RPM. It is not necessary to have a copy of the old RPM because a delta RPM can also work with an installed RPM. The delta RPM packages are even smaller in size than patch RPMs, which is an advantage when transferring update packages over the Internet. The drawback is that update operations with delta RPMs involved consume considerably more CPU cycles than plain or patch RPMs.

The makedeltarpm and applydelta binaries are part of the delta RPM suite (package deltarpm) and help you create and apply delta RPM packages. With the following commands, you can create a delta RPM called new.delta.rpm. The following command assumes that old.rpm and new.rpm are present:

> sudo makedeltarpm old.rpm new.rpm new.delta.rpm

Using applydeltarpm, you can reconstruct the new RPM from the file system if the old package is already installed:

> sudo applydeltarpm new.delta.rpm new.rpm

To derive it from the old RPM without accessing the file system, use the -r option:

> sudo applydeltarpm -r old.rpm new.delta.rpm new.rpm

See /usr/share/doc/packages/deltarpm/README for technical details.

With the -q option rpm initiates queries, making it possible to inspect an RPM archive (by adding the option -p) and to query the RPM database of installed packages. Several switches are available to specify the type of information required. See Table 9.1, “Essential RPM query options”.

For example, the command rpm -q -i wget displays the information shown in Example 9.2, “rpm -q -i wget”.

Name        : wget
Version     : 1.14
Release     : 17.1
Architecture: x86_64
Install Date: Mon 30 Jan 2017 14:01:29 CET
Group       : Productivity/Networking/Web/Utilities
Size        : 2046483
License     : GPL-3.0+
Signature   : RSA/SHA256, Thu 08 Dec 2016 07:48:44 CET, Key ID 70af9e8139db7c82
Source RPM  : wget-1.14-17.1.src.rpm
Build Date  : Thu 08 Dec 2016 07:48:34 CET
Build Host  : sheep09
Relocations : (not relocatable)
Packager    : https://www.suse.com/
Vendor      : SUSE LLC <https://www.suse.com/>
URL         : http://www.gnu.org/software/wget/
Summary     : A Tool for Mirroring FTP and HTTP Servers
Description :
Wget enables you to retrieve WWW documents or FTP files from a server.
This can be done in script files or via the command line.
Distribution: SUSE Linux Enterprise 15

The option -f only works if you specify the complete file name with its full path. Provide as many file names as desired. For example:

> rpm -q -f /bin/rpm /usr/bin/wget
rpm-4.14.1-lp151.13.10.x86_64
wget-1.19.5-lp151.4.1.x86_64

If only part of the file name is known, use a shell script as shown in Example 9.3, “Script to search for packages”. Pass the partial file name to the script shown as a parameter when running it.

#! /bin/sh
for i in $(rpm -q -a -l | grep $1); do
    echo "\"$i\" is in package:"
    rpm -q -f $i
    echo ""
done

The command rpm -q --changelog PACKAGE displays a detailed list of change information about a specific package, sorted by date.

With the installed RPM database, verification checks can be made. Initiate these with -V, or --verify. With this option, rpm shows all files in a package that have been changed since installation. rpm uses eight character symbols to give some hints about the following changes:

In the case of configuration files, the letter c is printed. For example, for changes to /etc/wgetrc (wget package):

> rpm -V wget
S.5....T c /etc/wgetrc

The files of the RPM database are placed in /var/lib/rpm. If the partition /usr has a size of 1 GB, this database can occupy nearly 30 MB, especially after a complete update. If the database is much larger than expected, it is useful to rebuild the database with the option --rebuilddb. Before doing this, make a backup of the old database. The cron script cron.daily makes daily copies of the database (packed with gzip) and stores them in /var/adm/backup/rpmdb. The number of copies is controlled by the variable MAX_RPMDB_BACKUPS (default: 5) in /etc/sysconfig/backup. The size of a single backup is approximately 1 MB for 1 GB in /usr.

All source packages carry a .src.rpm extension (source RPM).

Note: Installed source packages

Source packages can be copied from the installation medium to the hard disk and unpacked with YaST. They are not, however, marked as installed ([i]) in the package manager. This is because the source packages are not entered in the RPM database. Only installed operating system software is listed in the RPM database. When you “install” a source package, only the source code is added to the system.

The following directories must be available for rpm and rpmbuild in /usr/src/packages (unless you specified custom settings in a file like /etc/rpmrc):

When you install a source package with YaST, all the necessary components are installed in /usr/src/packages: the sources and the adjustments in SOURCES and the relevant .spec file in SPECS.

Warning: System integrity

Do not experiment with system components (glibc, rpm, etc.), because this endangers the stability of your system.

The following example uses the wget.src.rpm package. After installing the source package, you should have files similar to those in the following list:

/usr/src/packages/SOURCES/wget-1.19.5.tar.bz2
/usr/src/packages/SOURCES/wgetrc.patch
/usr/src/packages/SPECS/wget.spec

rpmbuild -bX /usr/src/packages/SPECS/wget.spec starts the compilation. X is a wild card for various stages of the build process (see the output of --help or the RPM documentation for details). The following is merely a brief explanation:

The binary RPM created can now be installed with rpm -i or, preferably, with rpm -U. Installation with rpm makes it appear in the RPM database.

Keep in mind that the BuildRoot directive in the spec file is deprecated. If you still need this feature, use the --buildroot option as a workaround.

The danger with many packages is that unwanted files are added to the running system during the build process. To prevent this use build, which creates a defined environment in which the package is built. To establish this chroot environment, the build script must be provided with a complete package tree. This tree can be made available on the hard disk, via NFS, or from DVD. Set the position with build --rpms DIRECTORY. Unlike rpm, the build command looks for the .spec file in the source directory. To build wget (like in the above example) with the DVD mounted in the system under /media/dvd, use the following commands as root:

# cd /usr/src/packages/SOURCES/
# mv ../SPECS/wget.spec .
# build --rpms /media/dvd/suse/ wget.spec

Subsequently, a minimum environment is established at /var/tmp/build-root. The package is built in this environment. Upon completion, the resulting packages are located in /var/tmp/build-root/usr/src/packages/RPMS.

The build script offers several additional options. For example, cause the script to prefer your own RPMs, omit the initialization of the build environment or limit the rpm command to one of the above-mentioned stages. Access additional information with build --help and by reading the build man page.

Midnight Commander (mc) can display the contents of RPM archives and copy parts of them. It represents archives as virtual file systems, offering all usual menu options of Midnight Commander. Display the HEADER with F3. View the archive structure with the cursor keys and Enter. Copy archive components with F5.

A full-featured package manager is available as a YaST module. For details, see Chapter 8, Installing or removing software.